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Postdoctoral Fellow  |  Lin, Hsin-Nan  
 
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Publications
 
Journal Articles
 
1. Hsin-Nan Lin, Cédric Notredame, Jia-Ming Chang, Ting-Yi Sung, Wen-Lian Hsu, "Improving the alignment quality of consistency based aligners with an evaluation function using synonymous protein words," PLoS ONE, volume 6, number 12, pages e27872, December 2011.
2. Hsin-Nan Lin, Ting-Yi Sung, Shinn-Ying Ho, and Wen-Lian Hsu, "Improving protein secondary structure prediction based on short subsequences with local structure similarity," BMC Genomics, volume 11, number S4, December 2010.
3. Hsin-Nan Lin , Ching-Tai Chen , Ting-Yi Sung , Shinn-Ying Ho and Wen-Lian Hsu, "Protein subcellular localization prediction of eukaryotes using a knowledge-based approach," BMC Bioinformatics, volume 10, number S8, December 2009.
4. Ching-Tai Chen, Hsin-Nan Lin, Ting-Ying Sung, Wen-Lian Hsu, "HYPLOSP: A Knowledge-based Approach to Protein Local Structure Prediction," Journal of Bioinformatics and Computational Biology, volume 4, pages 1287-1307, 2006.
5. Hsin-Nan Lin, Jia-Ming Chang, Kuen-Pin Wu, Ting-Yi Sung and Wen-Lian Hsu, "HYPROSP II-A knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence," Bioinformatics, volume 21, number 15, pages 3227-3233, August 2005.
6. Hsin-Nan Lin, Kun-Pin Wu, Jia-Ming Chang, Ting-Yi Sung and Wen-Lian Hsu, "GANA-A Genetic Algorithm for NMR Backbone Resonance Assignment," Nucleic Acids Research, volume 33, number 14, pages 4593-4601, August 2005.
7. Hsin-Nan Lin, Jia-Ming Chang, Kuen-Pin Wu, Ting-Yi Sung and Wen-Lian Hsu, "HYPROSP II - A knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence," Bioinformatics, volume 21, pages 3227--3233, August 2005.
8. Hsin-Nan Lin, Kuen-Pin Wu, Jia-Ming Chang, Ting-Yi Sung and Wen-Lian Hsu, "GANA – A Genetic Algorithm for NMR Backbone Resonance Assignment," Nucleic Acids Research, volume 33, number 14, pages 4593-4601, August 2005.
9. Kuen-Pin Wu, Hsin-Nan Lin, Jia-Ming Chang, Ting-Yi Sung and Wen-Lian Hsu, "HYPROSP: a hybrid protein secondary structure prediction algorithm--a knowledge-based approach," Nucleic Acids Research, volume 32, number 17, pages 5059-5065, 2004.
 
 
Conference Papers
 
1. Ching-Tai Chen, Hsin-Nan Lin, Kun-Pin Wu, Ting-Yi Sung, and Wen-Lian Hsu, "A Knowledge-based Approach to Protein Local Structure Prediction," Asia Pacific Bioinformatics Conference (APBC), 2006, (acceptance rate: 29%)
2. Hua-Sheng Chiu, Hsin-Nan Lin, Allan Lo, Ting-Yi Sung, Wen-Lian Hsu, "A two-stage classifier for protein beta-turn prediction using support vector machines," Proceedings of IEEE International Conference on Granular Computing (IEEE GrC), 2006.
3. Kuen-Pin Wu, Hsin-Nan Lin, Ting-Yi Sung and Wen-Lian Hsu, "An Efficient Method to Find Protein Sequence Patterns and Its Applications," Proceedings of the 20th Workshop on Combinatorial Mathematics and Computation Theory, pages 45-51, August 2003.
4. Kuen-Pin Wu, Hsin-Nan Lin, Ting-Yi Sung and Wen-Lian Hsu, "A New Similarity Measure among Protein Sequences," Proceedings of 2nd IEEE Computational Systems Bioinformatics (CSB), pages 347-352, August 2003.
 
 
Others
 
1. Hsin-Nan Lin, Ting-Yi Sung and Wen-Lian Hsu, "Sequence and Genome Analysis: Methods and Applications," Z. Zhao, editor, iConcept Press, 2010.
 
 
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